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Intron Name: Anas_platyrhynchos_platyrhynchos_8_24892061_24894559_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

24892061 - 24894559

Intron Length:

2499

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ATA|GCATGACGT

5'SS Class:

weak_major

3'SS Sequence:

AAAGCATGGGGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

TTATTTGGAAAA

Flanking Amino Acid:

MCYVINILQLFFTVF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.8

0.16

1.3

52.9

43.5

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

-0.5

1.7

32.4

40.5

Minor 5ss

31.3

-2.1

4.1

49.1

42.3

Minor BPS

45.6

-0.3

2.1

61.74

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023647

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048402

24859657 - 24894574

34918