Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_25157411_25157683_R

Intron Information:

Intron Rank:

130600

Intron Class:

major

Intron Phase:

Intron Coordinates:

25157411 - 25157683

Intron Length:

273

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGATGG

5'SS Class:

major

3'SS Sequence:

TTCCCTTTACTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TATTTCTTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

1.2

64.6

42.3

Major BPS

0.92

0.9

86.2

29.1

Major PPT

75.1

0.56

0.8

70.1

35.1

Minor 5ss

33.7

-1.9

2.9

39.7

45.7

Minor BPS

85.1

1.18

0.9

92.77

28.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017505

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040290

25130874 - 25158379

27506