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Intron Name: Anas_platyrhynchos_platyrhynchos_8_25195082_25208061_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25195082 - 25208061

Intron Length:

12980

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTGAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

CTTATCTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TCATTCTTATCT

Flanking Amino Acid:

KLLGTFPRRDVTQLDPNKSL

Intron Amino Acid Position:

624

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

81.4

26.2

Major BPS

100

1.24

0.5

100

Major PPT

85.9

0.81

0.8

79.8

32.1

Minor 5ss

-2.1

2.7

37.8

40.1

Minor BPS

67.7

0.63

1.6

80.16

41.9

Associated Gene:

Gene:

FAF1

Ensembl Gene ID:

ENSAPLG00000002930

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028733

25194998 - 25339717

144720

ENSAPLT00000003018

25194998 - 25342007

147010