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Intron Name: Anas_platyrhynchos_platyrhynchos_8_25208278_25212354_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25208278 - 25212354

Intron Length:

4077

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGATGT

5'SS Class:

major

3'SS Sequence:

TTTCCATCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

GCAACCTGAATG

Flanking Amino Acid:

IRKEQEEEREAIRLSLEQSL

Intron Amino Acid Position:

552

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

68.5

39.2

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

80.1

0.68

0.8

77.9

29.6

Minor 5ss

32.8

-2

3.4

47.1

48.3

Minor BPS

50.5

-0.1

1.6

50.97

Associated Gene:

Gene:

FAF1

Ensembl Gene ID:

ENSAPLG00000002930

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028733

25194998 - 25339717

144720

ENSAPLT00000003018

25194998 - 25342007

147010