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Intron Name: Anas_platyrhynchos_platyrhynchos_8_25212433_25213024_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25212433 - 25213024

Intron Length:

592

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTTATTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAC

U12 Branch Point Sequence:

TTTCTTTTTATT

Flanking Amino Acid:

RISLEADRAKREAQEREMAE

Intron Amino Acid Position:

526

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

68.4

36.9

Major BPS

78.8

0.71

0.9

69.7

37.1

Major PPT

83.6

0.76

0.8

85.6

27.4

Minor 5ss

33.7

-1.9

3.1

43.4

44.3

Minor BPS

61.5

0.44

1.6

80.48

35.3

Associated Gene:

Gene:

FAF1

Ensembl Gene ID:

ENSAPLG00000002930

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028733

25194998 - 25339717

144720

ENSAPLT00000003018

25194998 - 25342007

147010