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Intron Name: Anas_platyrhynchos_platyrhynchos_8_25238044_25247747_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25238044 - 25247747

Intron Length:

9704

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

CATGTCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTTTTCATGT

Flanking Amino Acid:

QEAFYGKARDRKLLAIYLHH

Intron Amino Acid Position:

372

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

78.2

36.4

Major BPS

100

1.24

0.5

100

Major PPT

80.6

0.69

0.9

36.8

Minor 5ss

38.7

-1.3

3.4

53.8

43.6

Minor BPS

49.1

0.01

75.13

42.3

Associated Gene:

Gene:

FAF1

Ensembl Gene ID:

ENSAPLG00000002930

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028733

25194998 - 25339717

144720

ENSAPLT00000003018

25194998 - 25342007

147010