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Intron Name: Anas_platyrhynchos_platyrhynchos_8_25247866_25313136_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25247866 - 25313136

Intron Length:

65271

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

ATTACTACTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATGAA

U12 Branch Point Sequence:

GAATAATGAAAT

Flanking Amino Acid:

DLPLPSSSHSGIFLLIEIFI

Intron Amino Acid Position:

174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

81.8

38.5

Major BPS

67.7

0.44

38.9

Major PPT

71.4

0.48

0.9

68.2

37.9

Minor 5ss

39.7

-1.2

3.1

51.1

45.2

Minor BPS

44.6

-0.3

1.9

60.51

41.3

Associated Gene:

Gene:

FAF1

Ensembl Gene ID:

ENSAPLG00000002930

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028733

25194998 - 25339717

144720