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Intron Name: Anas_platyrhynchos_platyrhynchos_8_25274089_25304879_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25274089 - 25304879

Intron Length:

30791

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

AAGTCCTGATTT

Flanking Amino Acid:

NFSGSSTIQEVKRNVYDLTS

Intron Amino Acid Position:

220

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

81.3

32.8

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

1.01

0.6

88.4

28.7

Minor 5ss

-2.4

3.2

40.6

45.6

Minor BPS

53.4

0.19

1.7

68.64

42.2

Associated Gene:

Gene:

FAF1

Ensembl Gene ID:

ENSAPLG00000002930

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003018

25194998 - 25342007

147010