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Intron Name: Anas_platyrhynchos_platyrhynchos_8_25313226_25313574_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25313226 - 25313574

Intron Length:

349

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGTTTT

5'SS Class:

major

3'SS Sequence:

TTTCTTTCCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAA

U12 Branch Point Sequence:

TTTACAATGATT

Flanking Amino Acid:

GWKTGDVDDSTVLKTLHLPK

Intron Amino Acid Position:

155

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

1.1

80.8

34.4

Major BPS

73.5

0.59

81.3

29.9

Major PPT

88.9

0.88

0.6

88.5

Minor 5ss

48.1

-0.2

2.8

68.1

42.7

Minor BPS

51.5

0.13

1.9

78.44

37.4

Associated Gene:

Gene:

FAF1

Ensembl Gene ID:

ENSAPLG00000002930

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028733

25194998 - 25339717

144720

ENSAPLT00000003018

25194998 - 25342007

147010