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Intron Name: Anas_platyrhynchos_platyrhynchos_8_25337016_25339702_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

25337016 - 25339702

Intron Length:

2687

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAT|GCTTGAATC

5'SS Class:

weak_major

3'SS Sequence:

TTTTTCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATGCTTTTAATT

Flanking Amino Acid:

DVLADACTGIENIDE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.6

0.13

1.5

65.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

95.4

1.02

0.6

88.7

28.3

Minor 5ss

32.6

-2

3.9

49.5

39.8

Minor BPS

66.1

0.58

1.2

74.92

36.3

Associated Gene:

Gene:

FAF1

Ensembl Gene ID:

ENSAPLG00000002930

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028733

25194998 - 25339717

144720