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Intron Name: Anas_platyrhynchos_platyrhynchos_8_25428676_25429230_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25428676 - 25429230

Intron Length:

555

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTTAC

5'SS Class:

major

3'SS Sequence:

TTTGTTTCCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTAAAT

U12 Branch Point Sequence:

AATGTGTTAACA

Flanking Amino Acid:

GRDGSEKKIRECVICMMDFV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

72.1

34.3

Major BPS

0.5

1.1

76.9

32.8

Major PPT

84.2

0.77

0.8

77.2

37.1

Minor 5ss

41.8

-0.9

2.8

49.1

41.3

Minor BPS

52.3

0.07

2.1

66.22

40.3

Associated Gene:

Gene:

RNF11

Ensembl Gene ID:

ENSAPLG00000022113

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028730

25400345 - 25429402

29058