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Intron Name: Anas_platyrhynchos_platyrhynchos_8_25444696_25446653_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25444696 - 25446653

Intron Length:

1958

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATCAGT

5'SS Class:

strong_major

3'SS Sequence:

CTTCATCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

GTTTTCTAAAAT

Flanking Amino Acid:

EAEEALARSPATELLADDQC

Intron Amino Acid Position:

465

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

74.6

41.7

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

82.9

0.74

0.8

76.8

31.4

Minor 5ss

41.2

-1

2.9

58.4

45.7

Minor BPS

63.6

0.51

1.8

81.62

39.7

Associated Gene:

Gene:

TTC39A

Ensembl Gene ID:

ENSAPLG00000003729

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003841

25440633 - 25477552

36920