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Intron Name: Anas_platyrhynchos_platyrhynchos_8_25446766_25448750_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25446766 - 25448750

Intron Length:

1985

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTTAG

5'SS Class:

strong_major

3'SS Sequence:

TCCCTGACCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATTAA

U12 Branch Point Sequence:

TCTCCCTGACCT

Flanking Amino Acid:

NPVPLPVPPLEMMYIWNGYA

Intron Amino Acid Position:

428

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

76.7

34.9

Major BPS

67.7

0.44

58.3

38.4

Major PPT

64.8

0.33

0.8

62.2

33.3

Minor 5ss

39.7

-1.2

2.8

46.1

43.6

Minor BPS

59.6

0.38

1.8

78.42

43.5

Associated Gene:

Gene:

TTC39A

Ensembl Gene ID:

ENSAPLG00000003729

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003841

25440633 - 25477552

36920