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Intron Name: Anas_platyrhynchos_platyrhynchos_8_25449603_25449942_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

25449603 - 25449942

Intron Length:

340

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAAATTT

5'SS Class:

strong_major

3'SS Sequence:

ATTACGTTACAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATCTGAA

U12 Branch Point Sequence:

AAAGCCTTAATG

Flanking Amino Acid:

PFGDNEVELFRWMPVTANGD

Intron Amino Acid Position:

407

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

27.7

Major BPS

73.3

0.58

0.9

63.4

35.6

Major PPT

56.5

0.15

1.2

54.1

44.4

Minor 5ss

43.2

-0.7

3.3

64.8

46.5

Minor BPS

63.1

0.27

1.5

59.95

41.9

Associated Gene:

Gene:

TTC39A

Ensembl Gene ID:

ENSAPLG00000003729

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045069

25449572 - 25476678

27107