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Intron Name: Anas_platyrhynchos_platyrhynchos_8_25450035_25451722_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25450035 - 25451722

Intron Length:

1688

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

ATTGCATTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTCAT

U12 Branch Point Sequence:

ATATTCTTGATT

Flanking Amino Acid:

LLSKENTWSKATYIYMKAAY

Intron Amino Acid Position:

357

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.5

1.07

0.7

84.1

30.2

Major BPS

83.4

0.83

0.8

83.7

25.7

Major PPT

77.6

0.62

0.9

70.4

39.6

Minor 5ss

39.6

-1.2

2.8

49.9

46.3

Minor BPS

72.4

0.79

1.1

81.38

33.9

Associated Gene:

Gene:

TTC39A

Ensembl Gene ID:

ENSAPLG00000003729

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045069

25449572 - 25476678

27107

ENSAPLT00000003841

25440633 - 25477552

36920