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Intron Name: Anas_platyrhynchos_platyrhynchos_8_25452919_25453580_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25452919 - 25453580

Intron Length:

662

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGATTG

5'SS Class:

strong_major

3'SS Sequence:

TTATGCATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTATTACTT

Flanking Amino Acid:

CYHTFMTFVLGTGKGNVEEA

Intron Amino Acid Position:

260

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.8

0.99

0.8

81.6

33.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

74.1

0.54

0.9

71.3

39.3

Minor 5ss

41.6

-0.9

3.1

55.7

48.5

Minor BPS

62.1

0.46

1.8

84.39

36.6

Associated Gene:

Gene:

TTC39A

Ensembl Gene ID:

ENSAPLG00000003729

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045069

25449572 - 25476678

27107

ENSAPLT00000003841

25440633 - 25477552

36920