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Intron Name: Anas_platyrhynchos_platyrhynchos_8_25453690_25460039_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25453690 - 25460039

Intron Length:

6350

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTGCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTTTCTAATACT

Flanking Amino Acid:

LEFVGFSGNKEHGLLQLQEG

Intron Amino Acid Position:

224

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

70.2

40.4

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

79.7

0.67

0.9

75.8

38.1

Minor 5ss

32.2

-2

3.7

45.9

49.3

Minor BPS

49.8

0.06

2.2

80.88

40.9

Associated Gene:

Gene:

TTC39A

Ensembl Gene ID:

ENSAPLG00000003729

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045069

25449572 - 25476678

27107

ENSAPLT00000003841

25440633 - 25477552

36920