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Intron Name: Anas_platyrhynchos_platyrhynchos_8_25463984_25466950_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25463984 - 25466950

Intron Length:

2967

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TCATTTCCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTCAT

U12 Branch Point Sequence:

ACATCTTTCATT

Flanking Amino Acid:

LQRAALTFLQDENMVSFIKG

Intron Amino Acid Position:

147

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

89.6

24.2

Major BPS

83.4

0.83

0.8

83.7

25.7

Major PPT

74.4

0.55

0.9

70.2

34.9

Minor 5ss

57.8

0.27

2.3

75.5

40.6

Minor BPS

0.3

1.7

70.49

41.3

Associated Gene:

Gene:

TTC39A

Ensembl Gene ID:

ENSAPLG00000003729

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003841

25440633 - 25477552

36920