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Intron Name: Anas_platyrhynchos_platyrhynchos_8_25466116_25466946_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

25466116 - 25466946

Intron Length:

831

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTTTTTTTT

5'SS Class:

weak_major

3'SS Sequence:

TGGGAGTTGCCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TTTATAATGACT

Flanking Amino Acid:

QRAALTFLQVYGLCFVLFAV

Intron Amino Acid Position:

146

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.5

0.15

1.3

67.5

37.9

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

55.7

0.13

1.2

46.4

49.6

Minor 5ss

53.9

0.13

2.3

72.9

36.5

Minor BPS

49.9

0.08

1.9

78.07

37.7

Associated Gene:

Gene:

TTC39A

Ensembl Gene ID:

ENSAPLG00000003729

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045069

25449572 - 25476678

27107