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Intron Name: Anas_platyrhynchos_platyrhynchos_8_25467583_25468246_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25467583 - 25468246

Intron Length:

664

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

GACTTTTCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAGAA

U12 Branch Point Sequence:

ATGTTCAGAATG

Flanking Amino Acid:

TMKEAQATCQKFRKKSTVAD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

35.3

Major BPS

64.9

0.37

37.5

Major PPT

79.1

0.66

0.9

73.2

36.9

Minor 5ss

-1.4

3.3

49.5

41.1

Minor BPS

48.1

-0.2

1.8

55.21

40.3

Associated Gene:

Gene:

TTC39A

Ensembl Gene ID:

ENSAPLG00000003729

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045069

25449572 - 25476678

27107

ENSAPLT00000003841

25440633 - 25477552

36920