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Intron Name: Anas_platyrhynchos_platyrhynchos_8_25468379_25474568_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25468379 - 25474568

Intron Length:

6190

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGAAT

U12 Branch Point Sequence:

TGTTCTTTGAAT

Flanking Amino Acid:

FSDALASLQAKTKDSMYHAL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

72.5

39.9

Major BPS

74.6

0.61

1.4

34.5

Major PPT

96.3

1.04

0.5

92.6

17.2

Minor 5ss

41.3

-1

2.8

49.6

Minor BPS

72.1

0.78

1.3

85.07

34.9

Associated Gene:

Gene:

TTC39A

Ensembl Gene ID:

ENSAPLG00000003729

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045069

25449572 - 25476678

27107

ENSAPLT00000003841

25440633 - 25477552

36920