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Intron Name: Anas_platyrhynchos_platyrhynchos_8_25474697_25477519_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

25474697 - 25477519

Intron Length:

2823

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTGGAGCA

5'SS Class:

major

3'SS Sequence:

CAGATGTGCTGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAGTAAT

U12 Branch Point Sequence:

AAGTAATGCACT

Flanking Amino Acid:

SRGGHEDDKEFILSSSGRSP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.4

0.43

1.2

60.8

38.2

Major BPS

67.8

0.44

1.1

67.7

36.5

Major PPT

44.3

-0.3

1.7

45.8

45.4

Minor 5ss

25.7

-2.8

3.2

31.1

42.5

Minor BPS

41.2

-0.6

2.2

59.15

43.2

Associated Gene:

Gene:

TTC39A

Ensembl Gene ID:

ENSAPLG00000003729

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003841

25440633 - 25477552

36920