Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_25493849_25496154_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25493849 - 25496154

Intron Length:

2306

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

ATTTTAATCTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTCATTTTAAAT

Flanking Amino Acid:

TPTRPCPPPPGKRPINQIDS

Intron Amino Acid Position:

776

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.8

0.9

74.3

34.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

66.6

0.37

1.1

38.9

Minor 5ss

33.2

-1.9

3.4

45.7

43.4

Minor BPS

63.9

0.52

1.4

77.18

39.4

Associated Gene:

Gene:

EPS15

Ensembl Gene ID:

ENSAPLG00000004292

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004514

25491620 - 25524922

33303