About Basic Search Advanced Search Downloads

© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

Contact Us

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_25501751_25502299_R

Intron Information:

Intron Rank:
14
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
25501751 - 25502299
Intron Length:
549

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CCA|GTGAGTAAA
5'SS Class:
major
3'SS Sequence:
TATCCTTACATAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TATTTAT
U12 Branch Point Sequence:
TTATCCTTACAT
Flanking Amino Acid:
EEEQINNASPARNSPETTAA
Intron Amino Acid Position:
559

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
74.1
0.57
1
73.4
32.4
Major BPS
88.7
0.96
0.8
78
36.5
Major PPT
69.9
0.45
0.9
65.6
34.8
Minor 5ss
31.8
-2.1
2.7
38.8
40.3
Minor BPS
70
0.71
1.7
86.4
39.1

Associated Gene:

Gene:
EPS15
Ensembl Gene ID:
ENSAPLG00000004292
Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000004514
25491620 - 25524922
33303