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Intron Name: Anas_platyrhynchos_platyrhynchos_8_25601873_25607113_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25601873 - 25607113

Intron Length:

5241

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATTTC

5'SS Class:

strong_major

3'SS Sequence:

AGGTTATATGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATGAA

U12 Branch Point Sequence:

ATTACTGGGATT

Flanking Amino Acid:

TILRHTLQLQYLLQAFSTSA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

0.8

84.7

26.5

Major BPS

66.7

0.41

57.8

Major PPT

62.4

0.28

56.3

43.4

Minor 5ss

44.1

-0.6

2.9

61.1

43.8

Minor BPS

44.7

-0.3

2.1

66.24

38.8

Associated Gene:

Gene:

OSBPL9

Ensembl Gene ID:

ENSAPLG00000001003

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023356

25586258 - 25636002

49745