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Intron Name: Anas_platyrhynchos_platyrhynchos_8_25629486_25630925_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25629486 - 25630925

Intron Length:

1440

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCTTG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTACGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGAAAT

U12 Branch Point Sequence:

TTTTTCTTTACG

Flanking Amino Acid:

QVRLGMDLTKVVLPTFILER

Intron Amino Acid Position:

342

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.9

78.8

38.3

Major BPS

67.2

0.43

1.2

73.3

39.1

Major PPT

83.8

0.76

0.8

80.9

29.9

Minor 5ss

47.5

-0.2

2.8

64.1

47.4

Minor BPS

72.7

0.57

1.6

79.16

37.2

Associated Gene:

Gene:

OSBPL9

Ensembl Gene ID:

ENSAPLG00000001003

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023356

25586258 - 25636002

49745

ENSAPLT00000022533

25624307 - 25636002

11696

ENSAPLT00000042194

25588875 - 25636002

47128

ENSAPLT00000001305

25587507 - 25636002

48496

ENSAPLT00000039781

25598649 - 25636002

37354

ENSAPLT00000025667

25608342 - 25636002

27661