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Intron Name: Anas_platyrhynchos_platyrhynchos_8_25632936_25633190_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25632936 - 25633190

Intron Length:

255

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTATCTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATATCTTTATCT

Flanking Amino Acid:

VAEQVSHHPPISAFYAECYN

Intron Amino Acid Position:

450

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

77.8

33.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

87.5

0.84

0.7

85.5

27.9

Minor 5ss

41.3

-1

2.8

49.5

41.2

Minor BPS

0.71

1.5

83.24

37.7

Associated Gene:

Gene:

OSBPL9

Ensembl Gene ID:

ENSAPLG00000001003

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023356

25586258 - 25636002

49745

ENSAPLT00000022533

25624307 - 25636002

11696

ENSAPLT00000042194

25588875 - 25636002

47128

ENSAPLT00000001305

25587507 - 25636002

48496

ENSAPLT00000039781

25598649 - 25636002

37354

ENSAPLT00000025667

25608342 - 25636002

27661