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Intron Name: Anas_platyrhynchos_platyrhynchos_8_25678052_25711191_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25678052 - 25711191

Intron Length:

33140

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTGTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAA

U12 Branch Point Sequence:

TAAAGCTTAAAT

Flanking Amino Acid:

NDKRVKLQIWDTAGQERYRT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

75.2

36.3

Major BPS

77.8

0.69

78.2

31.8

Major PPT

87.6

0.85

0.8

80.3

37.3

Minor 5ss

33.5

-1.9

3.1

36.8

40.4

Minor BPS

55.2

0.24

1.9

72.66

43.3

Associated Gene:

Gene:

RAB3B

Ensembl Gene ID:

ENSAPLG00000004148

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004250

25668210 - 25711419

43210