Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_25805740_25806937_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25805740 - 25806937

Intron Length:

1198

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTAAGTTGT

5'SS Class:

major

3'SS Sequence:

TTCCTTTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TCTGATACAATT

Flanking Amino Acid:

NLLSMVKIVNYVNRKCWCFT

Intron Amino Acid Position:

238

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

1.1

73.5

37.9

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

88.4

0.86

0.6

84.2

23.7

Minor 5ss

44.5

-0.6

2.9

64.2

41.4

Minor BPS

43.2

-0.4

1.9

61.59

42.8

Associated Gene:

Gene:

ZFYVE9

Ensembl Gene ID:

ENSAPLG00000004605

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004763

25797689 - 25825824

28136