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Intron Name: Anas_platyrhynchos_platyrhynchos_8_25822481_25823392_F


Intron Information:

Intron Rank:
12

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
25822481 - 25823392

Intron Length:
912

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAAGAACT

5'SS Class:
strong_major

3'SS Sequence:
TTTGGTTCTCTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTATGAG

U12 Branch Point Sequence:
CTTGGCTTATGA

Flanking Amino Acid:
GYLAKSSIVEDGVMVQITAE

Intron Amino Acid Position:
505

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
93.1
1.02
0.7
87.2
27

Major BPS
60.7
0.27
1.6
59.7
46.7

Major PPT
78.1
0.63
0.9
70.2
41.3

Minor 5ss
36.1
-1.6
3
50.2
45.8

Minor BPS
44.3
-0.4
2.3
58.19
47.7

Associated Gene:

Gene:
ZFYVE9

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

25797689 - 25825824
28136