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Intron Name: Anas_platyrhynchos_platyrhynchos_8_25871254_25872534_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

25871254 - 25872534

Intron Length:

1281

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTGGTAAGT

5'SS Class:

weak_major

3'SS Sequence:

TCTTTCTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACAAAT

U12 Branch Point Sequence:

TCTTTCTTTACA

Flanking Amino Acid:

AKNRNSKDDAILNGLQELGS

Intron Amino Acid Position:

354

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.9

0.14

1.1

57.3

41.4

Major BPS

69.5

0.48

73.5

28.6

Major PPT

92.2

0.95

0.6

87.4

23.1

Minor 5ss

30.9

-2.2

3.3

44.1

43.7

Minor BPS

0.65

1.6

78.67

37.8

Associated Gene:

Gene:

ORC1

Ensembl Gene ID:

ENSAPLG00000005106

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005367

25860231 - 25876559

16329