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Intron Name: Anas_platyrhynchos_platyrhynchos_8_25873871_25874360_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25873871 - 25874360

Intron Length:

490

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGTATG

5'SS Class:

strong_major

3'SS Sequence:

TCTGCTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTTAA

U12 Branch Point Sequence:

GTGTTGGTATTT

Flanking Amino Acid:

AVETIIESVLVIPLHPKEEL

Intron Amino Acid Position:

130

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

0.9

76.2

Major BPS

63.3

0.33

1.2

55.4

41.7

Major PPT

81.3

0.7

0.8

76.7

31.9

Minor 5ss

45.6

-0.5

2.5

56.4

42.4

Minor BPS

39.3

-0.7

2.6

59.24

44.9

Associated Gene:

Gene:

ORC1

Ensembl Gene ID:

ENSAPLG00000005106

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005367

25860231 - 25876559

16329