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Intron Name: Anas_platyrhynchos_platyrhynchos_8_25879413_25879583_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25879413 - 25879583

Intron Length:

171

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTCGGAAA

5'SS Class:

major

3'SS Sequence:

TAATTTCTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGATAAA

U12 Branch Point Sequence:

AAAGCCGTAATT

Flanking Amino Acid:

VCDIILPRLQKRYVLEEAEQ

Intron Amino Acid Position:

167

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.5

0.46

1.2

67.1

39.6

Major BPS

54.7

0.12

1.2

56.1

37.3

Major PPT

78.2

0.63

0.9

70.6

40.6

Minor 5ss

26.9

-2.7

31.3

42.5

Minor BPS

50.2

0.08

2.1

68.29

42.7

Associated Gene:

Gene:

PRPF38A

Ensembl Gene ID:

ENSAPLG00000005827

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006071

25877800 - 25881041

3242