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Intron Name: Anas_platyrhynchos_platyrhynchos_8_25879695_25880118_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25879695 - 25880118

Intron Length:

424

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

CCACTGCTTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACAGAA

U12 Branch Point Sequence:

TTTTTCCCCACT

Flanking Amino Acid:

SEEEEEEDEKLERAPSPDHR

Intron Amino Acid Position:

204

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

1.1

31.8

Major BPS

57.1

0.18

52.9

34.1

Major PPT

71.2

0.48

0.9

Minor 5ss

29.3

-2.4

2.9

35.1

41.4

Minor BPS

49.3

0.03

2.3

80.59

41.2

Associated Gene:

Gene:

PRPF38A

Ensembl Gene ID:

ENSAPLG00000005827

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006071

25877800 - 25881041

3242