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Intron Name: Anas_platyrhynchos_platyrhynchos_8_25951158_25951511_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

25951158 - 25951511

Intron Length:

354

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCGGAGGTG

5'SS Class:

major

3'SS Sequence:

GCGGCACGATGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GCGGCAC

U12 Branch Point Sequence:

CGCGGCACGATG

Flanking Amino Acid:

PSEACSAECSSYLNA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.2

0.45

1.1

63.4

38.3

Major BPS

-0.7

1.4

36.7

42.3

Major PPT

40.8

-0.5

1.6

36.6

39.7

Minor 5ss

-4

4.1

27.2

44.5

Minor BPS

32.4

-1.5

1.9

27.56

Associated Gene:

Gene:

SHISAL2A

Ensembl Gene ID:

ENSAPLG00000023874

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020092

25951141 - 25963877

12737