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Intron Name: Anas_platyrhynchos_platyrhynchos_8_25959919_25963718_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25959919 - 25963718

Intron Length:

3800

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCTGGATAT

5'SS Class:

major

3'SS Sequence:

GCACTCTTATCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAG

U12 Branch Point Sequence:

GCACTCTTATCA

Flanking Amino Acid:

TGLHLQMAGKQNKLVWIACP

Intron Amino Acid Position:

114

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.2

60.7

40.8

Major BPS

0.52

1.5

79.6

35.6

Major PPT

68.4

0.41

66.3

39.3

Minor 5ss

24.2

-3

38.3

46.8

Minor BPS

51.7

0.05

1.6

58.09

41.2

Associated Gene:

Gene:

SHISAL2A

Ensembl Gene ID:

ENSAPLG00000023874

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020092

25951141 - 25963877

12737