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Intron Name: Anas_platyrhynchos_platyrhynchos_8_26037370_26038465_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26037370 - 26038465

Intron Length:

1096

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TCTCTGTGTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTTAT

U12 Branch Point Sequence:

TGTACCTTACTT

Flanking Amino Acid:

VKQACVGYVYGDSTCGQRAI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.8

79.3

28.9

Major BPS

75.1

0.62

65.6

Major PPT

65.4

0.35

1.1

66.1

38.9

Minor 5ss

30.7

-2.2

2.6

33.5

35.6

Minor BPS

66.5

0.6

1.7

81.54

40.1

Associated Gene:

Gene:

SCP2

Ensembl Gene ID:

ENSAPLG00000008197

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008530

26036645 - 26053128

16484