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Intron Name: Anas_platyrhynchos_platyrhynchos_8_26042007_26042747_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26042007 - 26042747

Intron Length:

741

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAGGTATA

5'SS Class:

strong_major

3'SS Sequence:

GTACTTCTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

GATATTTTAACT

Flanking Amino Acid:

TFEEKSCLKVVGYDMTKRAA

Intron Amino Acid Position:

250

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

79.8

35.3

Major BPS

89.7

0.98

0.7

89.9

Major PPT

79.3

0.66

0.9

72.6

37.4

Minor 5ss

38.1

-1.3

3.1

47.2

43.7

Minor BPS

69.2

0.68

1.2

78.38

37.5

Associated Gene:

Gene:

SCP2

Ensembl Gene ID:

ENSAPLG00000008197

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008530

26036645 - 26053128

16484