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Intron Name: Anas_platyrhynchos_platyrhynchos_8_26042896_26045084_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26042896 - 26045084

Intron Length:

2189

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATAGCA

5'SS Class:

strong_major

3'SS Sequence:

TACTGTTCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAA

U12 Branch Point Sequence:

TTTTCTTTTATA

Flanking Amino Acid:

TYEALGLCPEGKACELIDRG

Intron Amino Acid Position:

299

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.72

70.7

33.2

Major BPS

78.6

0.71

78.6

Major PPT

74.2

0.55

0.9

66.1

40.5

Minor 5ss

30.8

-2.2

3.3

45.5

Minor BPS

72.9

0.71

1.5

82.82

31.5

Associated Gene:

Gene:

SCP2

Ensembl Gene ID:

ENSAPLG00000008197

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008530

26036645 - 26053128

16484