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Intron Name: Anas_platyrhynchos_platyrhynchos_8_26075740_26077696_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26075740 - 26077696

Intron Length:

1957

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGAATC

5'SS Class:

strong_major

3'SS Sequence:

CTGCTTTCCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAA

U12 Branch Point Sequence:

GAATCTAAACAG

Flanking Amino Acid:

TNEGMDNETFWKLSSLEYLD

Intron Amino Acid Position:

276

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

0.9

76.8

31.7

Major BPS

76.5

0.66

0.8

75.9

24.9

Major PPT

64.9

0.34

63.5

37.3

Minor 5ss

32.7

-2

40.8

39.5

Minor BPS

36.3

-1.1

1.9

36.34

38.6

Associated Gene:

Gene:

PODN

Ensembl Gene ID:

ENSAPLG00000008749

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009095

26063800 - 26083454

19655