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Intron Name: Anas_platyrhynchos_platyrhynchos_8_26081160_26083291_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26081160 - 26083291

Intron Length:

2132

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGTCA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTGTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

CTTATTTTAACA

Flanking Amino Acid:

STPKIKGIYLRFNKIAVGAL

Intron Amino Acid Position:

545

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

69.3

Major BPS

89.7

0.98

0.7

89.9

Major PPT

74.4

0.55

1.1

74.5

39.3

Minor 5ss

35.6

-1.6

3.5

47.4

48.2

Minor BPS

70.6

0.64

1.3

75.15

36.6

Associated Gene:

Gene:

PODN

Ensembl Gene ID:

ENSAPLG00000008749

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009095

26063800 - 26083454

19655