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Intron Name: Anas_platyrhynchos_platyrhynchos_8_26106835_26113444_R


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
26106835 - 26113444

Intron Length:
6610

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTATCACCC

5'SS Class:
major

3'SS Sequence:
CGCTGTTGTGCAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AACTCAA

U12 Branch Point Sequence:
AGTAACTCAATG

Flanking Amino Acid:
ALLIALATSSSSATLPITFK

Intron Amino Acid Position:
273

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
67.2
0.41
1.2
56.1
41.5

Major BPS
69.1
0.48
0.9
69.6
26.6

Major PPT
70.1
0.45
1
64.2
41.5

Minor 5ss
44.9
-0.6
2.8
61
43.4

Minor BPS
47.7
-0.3
1.8
53.22
41.2

Associated Gene:

Gene:
SLC1A7

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

26099354 - 26144067
44714