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Intron Name: Anas_platyrhynchos_platyrhynchos_8_26155300_26156121_R


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
26155300 - 26156121

Intron Length:
822

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACGTTGT

5'SS Class:
strong_major

3'SS Sequence:
TTAATTCCTACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCTTAAT

U12 Branch Point Sequence:
GAAATCTTAATT

Flanking Amino Acid:
PFNDINLLEKDWNDYDEKTK

Intron Amino Acid Position:
136

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
86.8
0.87
0.9
79
37.9

Major BPS
87
0.92
0.9
86.2
29.1

Major PPT
79.9
0.67
0.9
73.5
36.8

Minor 5ss
40.8
-1
3.1
58.8
45.7

Minor BPS
64.7
0.54
1.3
71.57
39

Associated Gene:

Gene:
CZIB

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

26155222 - 26163358
8137