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Intron Name: Anas_platyrhynchos_platyrhynchos_8_26163267_26163352_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
26163267 - 26163352

Intron Length:
86

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GGG|GTAGGTAGG

5'SS Class:
major

3'SS Sequence:
TCTCCCCTTACAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
GGCTGAC

U12 Branch Point Sequence:
TCTCCCCTTACA

Flanking Amino Acid:
MGRIGLQLRATL

Intron Amino Acid Position:
3

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.3
0.6
1.1
63.6
48.1

Major BPS
49.4
-0
1.3
42.8
41.8

Major PPT
82.8
0.74
0.7
76.2
26

Minor 5ss
33.3
-1.9
2.9
33.2
42.1

Minor BPS
53.9
0.12
2
70.11
41.5

Associated Gene:

Gene:
CZIB

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

26155222 - 26163358
8137