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Intron Name: Anas_platyrhynchos_platyrhynchos_8_26173033_26174134_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26173033 - 26174134

Intron Length:

1102

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGATTC

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCTTTGAAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

TTTTCTTTGAAG

Flanking Amino Acid:

VTEIFSQIPNNGLPKPSFDH

Intron Amino Acid Position:

278

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

78.8

29.4

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

0.7

82.8

26.1

Minor 5ss

44.2

-0.6

3.1

60.1

38.6

Minor BPS

70.8

0.51

1.4

75.57

36.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009340

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028680

26166632 - 26193856

27225

ENSAPLT00000009780

26167891 - 26199303

31413