Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_26197830_26198357_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26197830 - 26198357

Intron Length:

528

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGATT

5'SS Class:

strong_major

3'SS Sequence:

TTGTGGGTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTTAA

U12 Branch Point Sequence:

AATGTCTTAAGT

Flanking Amino Acid:

QYLFDRLACEIEALKSLTKE

Intron Amino Acid Position:

910

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.7

1.03

0.8

91.6

26.4

Major BPS

64.5

0.36

1.2

57.7

41.3

Major PPT

69.2

0.43

65.8

45.3

Minor 5ss

38.2

-1.3

3.4

56.9

47.4

Minor BPS

60.8

0.42

1.7

74.86

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009340

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009780

26167891 - 26199303

31413