Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_26371637_26372302_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26371637 - 26372302

Intron Length:

666

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGGTCG

5'SS Class:

major

3'SS Sequence:

CCGTGTCTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

TCCCCGCTGACC

Flanking Amino Acid:

LLLLKLHLGKGGVKECEEDQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

60.1

41.4

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

0.47

0.9

64.6

36.5

Minor 5ss

30.2

-2.3

3.4

47.1

Minor BPS

43.9

-0.5

2.3

55.87

42.8

Associated Gene:

Gene:

LRP8

Ensembl Gene ID:

ENSAPLG00000010336

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010806

26205427 - 26372372

166946

ENSAPLT00000030080

26205427 - 26372372

166946