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Intron Name: Anas_platyrhynchos_platyrhynchos_8_26498596_26523628_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

26498596 - 26523628

Intron Length:

25033

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGCCAGGG

5'SS Class:

weak_major

3'SS Sequence:

GCAATCTCTGAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGTCAC

U12 Branch Point Sequence:

CAATCTCTGAAG

Flanking Amino Acid:

SPHHHQSPLETQCASEDMVS

Intron Amino Acid Position:

535

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.5

0.01

1.2

41.7

39.8

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

58.1

0.18

1.1

56.7

38.7

Minor 5ss

30.6

-2.2

3.5

37.5

45.2

Minor BPS

44.7

-0.5

1.8

45.8

40.5

Associated Gene:

Gene:

GLIS1

Ensembl Gene ID:

ENSAPLG00000013972

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044801

26498480 - 26604636

106157