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Intron Name: Anas_platyrhynchos_platyrhynchos_8_26532960_26536352_R


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
26532960 - 26536352

Intron Length:
3393

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACC|GTAAGCACG

5'SS Class:
major

3'SS Sequence:
CTCACACCTACAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATATGAA

U12 Branch Point Sequence:
CTTTCCTCACAC

Flanking Amino Acid:
AKHQRTHLDTKPYACQIPGC

Intron Amino Acid Position:
422

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
62.8
0.3
1.4
57.5
47.1

Major BPS
66.7
0.41
1
57.8
39

Major PPT
70.1
0.45
0.9
61.7
33.8

Minor 5ss
41.6
-0.9
2.8
54.9
42.2

Minor BPS
52.3
0.05
2
67.84
43.5

Associated Gene:

Gene:
GLIS1

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

26498480 - 26604636
106157

26498480 - 26604636
106157