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Intron Name: Anas_platyrhynchos_platyrhynchos_8_26696507_26697513_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26696507 - 26697513

Intron Length:

1007

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCAGT

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCCCCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

AATCTTGTAATT

Flanking Amino Acid:

DAQMHIWALEGLSHLVAASF

Intron Amino Acid Position:

502

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.9

81.8

38.5

Major BPS

84.4

0.85

1.1

34.5

Major PPT

0.38

67.3

26.7

Minor 5ss

41.1

-1

2.9

57.9

46.4

Minor BPS

49.1

0.01

1.9

68.17

37.1

Associated Gene:

Gene:

NDC1

Ensembl Gene ID:

ENSAPLG00000002028

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002171

26694107 - 26710559

16453